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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs8047655 chr16:24794064 G/A 4.32E-5 113 49.4 27.57 50.1 KM Plot
THYM rs8059004 chr16:24837905 G/A 4.74E-5 112 49.4 28.8 50.1 KM Plot
THYM rs874484 chr16:24803242 T/C 4.62E-5 112 46.6 27.33 50.1 KM Plot
THYM rs887911 chr7:76143705 T/G 3.38E-5 109 41.77 45.87 25.83 KM Plot
THYM rs9459883 chr6:167530517 G/C 3.22E-9 111 38.48 50.1 9.83 KM Plot
THYM rs993011 chr8:82701243 C/A 6.7E-5 113 42.25 37.27 22.5 KM Plot
UCEC rs10409676 chr19:32634974 T/A 1.33E-6 124 14.63 8.18 11.53 KM Plot
UCEC rs111233351 chr19:32644123 G/A 1.33E-6 124 14.63 8.18 11.53 KM Plot
UCEC rs112049425 chr20:37134699 ACTGC/A 9.41E-5 125 6.35 11.53 14.77 KM Plot
UCEC rs113007204 chr10:51593069 GACA/G 0 124 14.1 11.47 1.67 KM Plot
UCEC rs11419352 chr2:48832670 G/GT 7.62E-10 125 14.03 15.17 11.47 KM Plot
UCEC rs11592181 chr10:51582686 A/G 3.74E-7 125 11.23 11.47 14.1 KM Plot
UCEC rs11597667 chr10:51586514 A/T 0 125 14.4 9.78 1.67 KM Plot
UCEC rs11693317 chr2:48832414 A/C 9.21E-10 125 14.1 15.03 11.47 KM Plot
UCEC rs12040492 chr1:213081269 T/A 8.88E-8 123 14.65 10.97 2.38 KM Plot